PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022968213.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 333aa    MW: 37462.7 Da    PI: 4.535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022968213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19105155155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_022968213.1 105 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 155
                     59********.**********82....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEDSLFSHVK FTEHRSFTNK FSSRKQPPSQ NRLVRIAVTD PDATDSSSDE EGEFFERQRV  60
KRYVNEVKIQ TASRNAFLPS ARKRPAAEGS DSRRPAKAAP VMSGKKFRGV RQRPWGKWAA  120
EIRDPARRVR LWLGTYDTAE EAAMVYDNAA IQLRGPDALT NFAIPPPPLP ETEVEAANIP  180
SVSGSYDDSC EESHNLSSPT SVLRFRTPSL EESEKPQNSI GFQKPPPPLP PPLPPMADGQ  240
LRECQGETSF YEVYYTDFPK FEDVFQLPCS ESPMFLDEQP LYFEESIYNE GFSDLFTNLP  300
DDFGSPLLSS SISQVGEDYF QDILMGSDPL VVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-54ERF family protein