PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 451aa MW: 50138.3 Da PI: 6.3869 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.8 | 7.3e-52 | 33 | 160 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+evdiyk+ePwdL +++k++++e+yfFs dkky +g r nrat++gyWkatg+d++v XP_022968191.1 33 LAPGFRFHPTDEELVIYYLKRKVCGKSFRF-NAISEVDIYKSEPWDLAgkSRLKSRDQEYYFFSVLDKKYGNGARMNRATSQGYWKATGNDRQVR 126 579*************************99.89**************85348889999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vglkktLvf++grap+g++t+Wvmheyrl XP_022968191.1 127 H-DTRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 160 *.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 451 aa Download sequence |
MGSETLTLSP PLALTKPVAA ATAAAAAAAP TALAPGFRFH PTDEELVIYY LKRKVCGKSF 60 RFNAISEVDI YKSEPWDLAG KSRLKSRDQE YYFFSVLDKK YGNGARMNRA TSQGYWKATG 120 NDRQVRHDTR TVGLKKTLVF HSGRAPDGKR TNWVMHEYRL VDEELEKAGA GTGSSKDAYV 180 LCRVFHKSNI GPPNGHRYAP FIEEEWDDGG SVLIPGEEIA DGVVASHDTQ SERNSNSVCA 240 AEDRNNHVCG DGKDGMQEKT QFINKDLVMS NDPPRNSHSF LFMCKSEELE DYTPPSIIAN 300 PKPFSLMKYK RRRQSDLPSE LSKASENSSM SNEELSLSEI ATASQTDVTT SSEMTPTTKN 360 FLSTLVEYSL LESTEPKDSP APPPALETSD LSSSVHPSIL KFIQDLQHEI HKTSMERETL 420 KFELLSARAM ISILQSRIVV LNKEINDLKS N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10490.2 | 1e-119 | NAC family protein |