PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 418aa MW: 46986.4 Da PI: 5.0604 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 104.4 | 1.4e-32 | 58 | 197 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atk.... 79 lp+G++F+P+d+e+v +L++kv + + v+++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r +t XP_022968109.1 58 LPRGVKFDPSDQEIV-WHLQAKVGIGGsrlhpfI---DefiptVLEDDGICYTHPQKLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRkITGddfg 147 799************.889999987774565442...144444677778**********.677888899******************54445655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 + +W++tg++k+v+ ++ ++g+kk++v+y + ++ekt+Wvmh+y+l XP_022968109.1 148 DVRWHKTGRTKPVVI-DRVQKGCKKIMVLYMSfaKGGRAEKTNWVMHQYHL 197 788************.999***********6522666778*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MAGPSWLVDS NRIATKIKSA SGTSHPQSVE WKSNPSRSCP NCQHTIDNSD VAQEWPGLPR 60 GVKFDPSDQE IVWHLQAKVG IGGSRLHPFI DEFIPTVLED DGICYTHPQK LPGVKQDGSV 120 SHFFHRAIKA YNTGTRKRRK ITGDDFGDVR WHKTGRTKPV VIDRVQKGCK KIMVLYMSFA 180 KGGRAEKTNW VMHQYHLGTE EDERDGEYVI SKIFYQQQYV KHGEVTEQEI PQIVDAVKVD 240 PRTPKSATPE PPRVECRCVN VDQEWDSVVI STSALVEVPS ESDKSDKHDM IKLVGCSDEV 300 IDNNENNIDE EPKWWEGESQ NILDSQQLVE ALSLCDDLLQ SQSPPRDGNA NNGASRSKSL 360 FSEYSKLGPE DLKKDLEECQ NLVLDPGNIE LNTPPEFRLS QLDFGSQESF LAWGGKAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25580.1 | 1e-132 | NAC family protein |