PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968108.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 444aa MW: 50157.3 Da PI: 5.7576

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.2	1.6e-32	84	223	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atk.... 79 lp+G++F+P+d+e+v +L++kv + + v+++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r +t XP_022968108.1 84 LPRGVKFDPSDQEIV-WHLQAKVGIGGsrlhpfI---DefiptVLEDDGICYTHPQKLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRkITGddfg 173 799**********.889999987774565442...144444677778******.677888899**************54445655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 + +W++tg++k+v+ ++ ++g+kk++v+y + ++ekt+Wvmh+y+l XP_022968108.1 174 DVRWHKTGRTKPVVI-DRVQKGCKKIMVLYMSfaKGGRAEKTNWVMHQYHL 223 788********.999*******6522666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MKHNLFALCI RTQHSPWRCL LGVVFAFCRP SWLVDSNRIA TKIKSASGTS HPQSVEWKSN 60 PSRSCPNCQH TIDNSDVAQE WPGLPRGVKF DPSDQEIVWH LQAKVGIGGS RLHPFIDEFI 120 PTVLEDDGIC YTHPQKLPGV KQDGSVSHFF HRAIKAYNTG TRKRRKITGD DFGDVRWHKT 180 GRTKPVVIDR VQKGCKKIMV LYMSFAKGGR AEKTNWVMHQ YHLGTEEDER DGEYVISKIF 240 YQQQYVKHGE VTEQEIPQIV DAVKVDPRTP KSATPEPPRV ECRCVNVDQE WDSVVISTSA 300 LVEVPSESDK SDKHDMIKLV GCSDEVIDNN ENNIDEEPKW WEGESQNILD SQQLVEALSL 360 CDDLLQSQSP PRDGNANNGA SRSKSLFSEY SKLGPEDLKK DLEECQNLVL DPGNIELNTP 420 PEFRLSQLDF GSQESFLAWG GKAE

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MKHNLFALCI RTQHSPWRCL LGVVFAFCRP SWLVDSNRIA TKIKSASGTS HPQSVEWKSN  60
PSRSCPNCQH TIDNSDVAQE WPGLPRGVKF DPSDQEIVWH LQAKVGIGGS RLHPFIDEFI  120
PTVLEDDGIC YTHPQKLPGV KQDGSVSHFF HRAIKAYNTG TRKRRKITGD DFGDVRWHKT  180
GRTKPVVIDR VQKGCKKIMV LYMSFAKGGR AEKTNWVMHQ YHLGTEEDER DGEYVISKIF  240
YQQQYVKHGE VTEQEIPQIV DAVKVDPRTP KSATPEPPRV ECRCVNVDQE WDSVVISTSA  300
LVEVPSESDK SDKHDMIKLV GCSDEVIDNN ENNIDEEPKW WEGESQNILD SQQLVEALSL  360
CDDLLQSQSP PRDGNANNGA SRSKSLFSEY SKLGPEDLKK DLEECQNLVL DPGNIELNTP  420
PEFRLSQLDF GSQESFLAWG GKAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-129	NAC family protein