PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022968081.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family M-type_MADS
Protein Properties Length: 339aa    MW: 38320.2 Da    PI: 7.1514
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022968081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.52.3e-20953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr +n+  rq tf+kR++gi+KKA+ELS+LCd+++ +++fs+tgk
  XP_022968081.1  9 KRLDNTNGRQATFAKRKHGIIKKANELSILCDIDIILLMFSPTGK 53
                    68899**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGRVKLKIKR LDNTNGRQAT FAKRKHGIIK KANELSILCD IDIILLMFSP TGKPSLCSGK  60
RSIEEVIAKF AQQTPQERAK RKLESLEALR KTFKKLDHDV NIQDFLGTSS QTIEDLAGQA  120
KFLRTQLSEV HQRLSFWGNP EKINNVDHLA QMEDSLRESL NQVRVHKENL QKHPPVPLEF  180
ANQDGMHLPF DMSVEQQLQQ LQHYSWIPSD AQNIVLHDDP NFAPHRDVEC SASSSFASYP  240
GYFGTGRSPE ISNSGHENGV LPELTRTEPL RPQLGGQNSY MSYNVNFFND PRFQPAAEMK  300
LPVNPVDYRV NGNYDTAQLN WASSSGPCAV SLLDDHLFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.21e-105M-type_MADS family protein