PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022968080.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family M-type_MADS
Protein Properties Length: 340aa    MW: 38492.4 Da    PI: 7.1514
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022968080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.52.3e-20953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    kr +n+  rq tf+kR++gi+KKA+ELS+LCd+++ +++fs+tgk
  XP_022968080.1  9 KRLDNTNGRQATFAKRKHGIIKKANELSILCDIDIILLMFSPTGK 53
                    68899**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MGRVKLKIKR LDNTNGRQAT FAKRKHGIIK KANELSILCD IDIILLMFSP TGKPSLCSGK  60
RSIEEVIAKF AQQTPQERAK RKLESLEALR KTFKKLDHDV NIQDFLGTSQ TIEDLAGQAK  120
FLRTQLSEVH QRLSFWGNPE KINNVDHLAQ MEDSLRESLN QVRVHKENLQ KHPPVPLEFA  180
NQMQDGMHLP FDMSVEQQLQ QLQHYSWIPS DAQNIVLHDD PNFAPHRDVE CSASSSFASY  240
PGYFGTGRSP EISNSGHENG VLPELTRTEP LRPQLGGQNS YMSYNVNFFN DPRFQPAAEM  300
KLPVNPVDYR VNGNYDTAQL NWASSSGPCA VSLLDDHLFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.21e-104M-type_MADS family protein