PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968071.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 353aa MW: 39963.4 Da PI: 7.0027

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.3e-16	90	135	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_022968071.1 90 RGHWRPAEDTKLRELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 135 899***************************.*********996 PP
2	Myb_DNA-binding	55.3	1.5e-17	142	185	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_022968071.1 142 RRVFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 185 5679****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MGMLDDDHDD HDDFGVGVEE SLKLDLNRAI VSSSQESSEV LENGRGFWNF PFSCESMTRS 60 SETDFSDGFV ENMNEPLNKA SGAQSRLCAR GHWRPAEDTK LRELVALYGP QNWNLIAEKL 120 EGRSGKSCRL RWFNQLDPRI NRRVFSEEEE ERLMQAHRIY GNKWAMIARL FPGRTDNAVK 180 NHWHVIMARK YREQSRSYRR RKLNQSVYRK MEEDLSFLVL PNEQDNRHPT ARSPFGAVDY 240 GFLTQMATGG GESMNSHHRL NQPFFSSCSP LSTLNVLPDP KSRFWEGTGH GFVEPRSHHQ 300 YQPYNTAALA SNDGVGGSQT ATSHVLRGGS SSVTAETTKQ APPFIDFLGV GAT

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MGMLDDDHDD HDDFGVGVEE SLKLDLNRAI VSSSQESSEV LENGRGFWNF PFSCESMTRS  60
SETDFSDGFV ENMNEPLNKA SGAQSRLCAR GHWRPAEDTK LRELVALYGP QNWNLIAEKL  120
EGRSGKSCRL RWFNQLDPRI NRRVFSEEEE ERLMQAHRIY GNKWAMIARL FPGRTDNAVK  180
NHWHVIMARK YREQSRSYRR RKLNQSVYRK MEEDLSFLVL PNEQDNRHPT ARSPFGAVDY  240
GFLTQMATGG GESMNSHHRL NQPFFSSCSP LSTLNVLPDP KSRFWEGTGH GFVEPRSHHQ  300
YQPYNTAALA SNDGVGGSQT ATSHVLRGGS SSVTAETTKQ APPFIDFLGV GAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	9e-77	MYB family protein