PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 359aa MW: 40538.1 Da PI: 6.9975 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51 | 3.4e-16 | 90 | 135 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_022968070.1 90 RGHWRPAEDTKLRELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 135 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 142 | 185 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_022968070.1 142 RRVFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 185 5679******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MGMLDDDHDD HDDFGVGVEE SLKLDLNRAI VSSSQESSEV LENGRGFWNF PFSCESMTRS 60 SETDFSDGFV ENMNEPLNKA SGAQSRLCAR GHWRPAEDTK LRELVALYGP QNWNLIAEKL 120 EGRSGKSCRL RWFNQLDPRI NRRVFSEEEE ERLMQAHRIY GNKWAMIARL FPGRTDNAVK 180 NHWHVIMARK YREQSRSYRR RKLNQSVYRK MEEDLSFLVL PNEQDNRHPT ARSPFGAVDY 240 GFLTQMATGG GESMNSHHRL NQPFFSSCSP LSTLNVLPGL MVCADPKSRF WEGTGHGFVE 300 PRSHHQYQPY NTAALASNDG VGGSQTATSH VLRGGSSSVT AETTKQAPPF IDFLGVGAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 9e-76 | MYB family protein |