PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022967950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | YABBY | ||||||||
Protein Properties | Length: 175aa MW: 19078.4 Da PI: 8.4986 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 155.1 | 6e-48 | 9 | 159 | 1 | 163 |
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 +d+++ se++Cyv+CnfCnt+lav +P l+ +vtv+CGhC++l ++ + q + + l ++++ sn++++ ++++s XP_022967950.1 9 MDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCI------------DHPLSFQSQVGFSNNIRKGASTSS 91 578999*************************************9865444333333222............223333333333344444444444 PP YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ss++ s++ +e+p + v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + XP_022967950.1 92 SSSSSSSSSMANESPSANFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 159 4444446677888999999***********************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MSSEDKASMD LVQPSEHLCY VKCNFCNTVL AVGIPCRRLL DTVTVKCGHC SNLSFLSTRP 60 PLQGQCIDHP LSFQSQVGFS NNIRKGASTS SSSSSSSSSS MANESPSANF VVKPPEKKHR 120 LPSAYNRFMK EEIQRIKAAN PEIPHREAFS AAAKNWARYI PNSVDGSASG THDNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 5e-65 | YABBY family protein |