PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967615.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 280aa MW: 31479.2 Da PI: 8.0939

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	200.2	6.1e-62	71	213	5	154
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskke 99 +++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpa+krrerq q ++ +++++ + +++ +kr+ ++++l + + ++ XP_022967615.1 71 SINCQDCGNQAKKDCSHLRCRTCCKSRGFHCQTHVKSTWVPATKRRERQLQRHQIVRQQSRLDRPDQTTSKRHG---ENQSLCVAPI----DTSG 158 579*******************************************99999988777665555555554442...3333333333....3347 PP DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le+ ++P+e +s+avfrcv+vs++dd ee+laYqt+v+igG +fkGiLydqG+++ XP_022967615.1 159 LEVVNFPAEFNSSAVFRCVKVSAIDDVEEQLAYQTSVNIGGRMFKGILYDQGPKS 213 89999*********************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MTGLFYLSEK QEENQEQRGK EQQLFLSKGL EIWPQQNLEN YISFGVGPSR RNFMINASDG 60 HDQFVPRLGF SINCQDCGNQ AKKDCSHLRC RTCCKSRGFH CQTHVKSTWV PATKRRERQL 120 QRHQIVRQQS RLDRPDQTTS KRHGENQSLC VAPIDTSGLE VVNFPAEFNS SAVFRCVKVS 180 AIDDVEEQLA YQTSVNIGGR MFKGILYDQG PKSTLNLSTG GESSYCYGGE DDSQALELVI 240 GASNGGWRSN KPTPFMESSL YPIPINTFTT GTQNFPSSRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	2e-62	SRS family protein