PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967565.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 1090aa MW: 121207 Da PI: 5.9616

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	182.5	4.8e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ k+rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+hekLKvg+++vl+cyYah+een++fqr XP_022967565.1 20 IEAKHRWLRPAEICEILRNYPKFQIASEPPDRPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022967565.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1090 aa Download sequence
MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP 180 SPTSPLTPFC EDGDTEDTGQ ATSRFRSFPT SPKMGNGLLM NKQDAGQSNF YFPHSSSNTA 240 VPAVDYVSQV QKDVLGGNIC GTNVTDSQKT LSSASWEEIL QHCTTGFQTV PSHVLSSLIE 300 PVSSGIVVGQ ENSIPGEPST SNSAITEDFG SSLTMNSNWQ VSFEDNTSSF SKEYVDQFPE 360 LYSVYGIDSR LTEQKSHNAT FGSGHEMSCA HPGIENEEIL PNNLELQFKE GESYSAMRLS 420 SENDTSKEGT VGYSLSLKQS LIDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST 480 VECGDMVDNS SLSPSLSEDQ LFSIIEFSPK STLADLETEV VIIGKFLGNN HGTKCYWSCM 540 FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEIREFDYLA GSAQDVDVTE 600 VYTAGATEEL YLHMRLERLL SHRSSNPPNN LSEGALEKRN LIRELISIKE EEDCHGEEPN 660 SHNVQIQHQN KEFLFVKLMK EKVYSWLIRK VIEGGKGPHI LDDEGQGLIH LAAALGYDWA 720 IRPIVAAGVS INFRDVNGWT ALHWAAFCGR ELTVGTLITL NAAPGLPADP SPENPLGIPP 780 SELASMNGHK GIAGFLAESS LTSYIESISM GETVKDGVLD VSKRKPVHTV SERRATPISD 840 GFMPADLSLK DSLTAVCNAT QAAGRIHLMF RMQSFQRKKL SECSPDELGS SDDTAISFAK 900 ARARKSGLSN SPAHAAAVHI QKKFRGWRMR KEFLLIRQRI VKIQAHVRGH QVRKQYKKIV 960 WSVGILDKII LRWRRKGSGL RGFRSDAAAK NPSAAVLEPP KEDDYDFLAK GRRQNEERFQ 1020 KALTRVKSMA QYPEGRDQYR RLLTVVQKCQ ETKASSMAIT STREEIIEGD DMIDIDSLLD 1080 DDALMSMTFD

Sequence ? help Back to Top

Protein Sequence Length: 1090 aa Download sequence

MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP  180
SPTSPLTPFC EDGDTEDTGQ ATSRFRSFPT SPKMGNGLLM NKQDAGQSNF YFPHSSSNTA  240
VPAVDYVSQV QKDVLGGNIC GTNVTDSQKT LSSASWEEIL QHCTTGFQTV PSHVLSSLIE  300
PVSSGIVVGQ ENSIPGEPST SNSAITEDFG SSLTMNSNWQ VSFEDNTSSF SKEYVDQFPE  360
LYSVYGIDSR LTEQKSHNAT FGSGHEMSCA HPGIENEEIL PNNLELQFKE GESYSAMRLS  420
SENDTSKEGT VGYSLSLKQS LIDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST  480
VECGDMVDNS SLSPSLSEDQ LFSIIEFSPK STLADLETEV VIIGKFLGNN HGTKCYWSCM  540
FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEIREFDYLA GSAQDVDVTE  600
VYTAGATEEL YLHMRLERLL SHRSSNPPNN LSEGALEKRN LIRELISIKE EEDCHGEEPN  660
SHNVQIQHQN KEFLFVKLMK EKVYSWLIRK VIEGGKGPHI LDDEGQGLIH LAAALGYDWA  720
IRPIVAAGVS INFRDVNGWT ALHWAAFCGR ELTVGTLITL NAAPGLPADP SPENPLGIPP  780
SELASMNGHK GIAGFLAESS LTSYIESISM GETVKDGVLD VSKRKPVHTV SERRATPISD  840
GFMPADLSLK DSLTAVCNAT QAAGRIHLMF RMQSFQRKKL SECSPDELGS SDDTAISFAK  900
ARARKSGLSN SPAHAAAVHI QKKFRGWRMR KEFLLIRQRI VKIQAHVRGH QVRKQYKKIV  960
WSVGILDKII LRWRRKGSGL RGFRSDAAAK NPSAAVLEPP KEDDYDFLAK GRRQNEERFQ  1020
KALTRVKSMA QYPEGRDQYR RLLTVVQKCQ ETKASSMAIT STREEIIEGD DMIDIDSLLD  1080
DDALMSMTFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein