PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022967301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 307aa MW: 34589.8 Da PI: 7.1513 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.7 | 5.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d v++ G g+W+ ++ g++R++k+c++rw +yl XP_022967301.1 14 KGPWTPEEDKKLIDFVARNGHGSWRNLPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ +++++ lG++ W++Ia++++ gRt++++k++w+++l XP_022967301.1 67 RGKFSEEEESAIIKLHSVLGNR-WSKIASHFP-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MGRSPCCDEI GVKKGPWTPE EDKKLIDFVA RNGHGSWRNL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SEEEESAIIK LHSVLGNRWS KIASHFPGRT DNEIKNFWNT HLKKKLLQMG 120 IDPNTHKPRT DLNHLLNNSQ LFNGIANYLN NDHLKLQAEL VKLQLLQNLC QLLNPTTPPQ 180 ALPSTPLDRL QNPNSNPSRA SFSTQNLNSS QLQAGFTSGF VSLSGFDDGD KNKAKIEEME 240 NFDYVQVENY YPILPPLTSE SETNPLGCST NSNSPSSSSS IFDSLESLMN EDEPSESYWN 300 NLLQSTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 4e-81 | MYB family protein |