PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022967284.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 351aa MW: 38305.1 Da PI: 7.5182 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25 | 3.3e-08 | 89 | 113 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+lC+ f++ GtC+y +C+FaH+ XP_022967284.1 89 FKTKLCCKFRA-GTCPYITNCNFAHS 113 69*********.*************8 PP | |||||||
2 | zf-CCCH | 18.7 | 3.2e-06 | 163 | 188 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 yk + C+ f+ C+yGd+C+F H+ XP_022967284.1 163 YKGRHCKKFYTEEGCPYGDSCTFLHD 188 78888********************7 PP | |||||||
3 | zf-CCCH | 42.3 | 1.2e-13 | 232 | 257 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt++C+ + tG+C++G++C+FaHg XP_022967284.1 232 WKTRICNKWELTGYCPFGSKCHFAHG 257 8************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MDYSGGNVVH VIPGMSSENW PGEVWATEEE YRAWNNGGGD GSIDTPSNSS YDQRQSQSRS 60 GSEPPNKKSR SSQDVTSSNR SKAIGKMFFK TKLCCKFRAG TCPYITNCNF AHSIEELRRP 120 PHNWQQEIVA AHEEEKVFSE PREEFQIPSL GTSNFGSESQ RSYKGRHCKK FYTEEGCPYG 180 DSCTFLHDEQ SKNRESVAIS LGPGGYSGGG GGGGGGGGGG SGNGSNSKPS NWKTRICNKW 240 ELTGYCPFGS KCHFAHGAAE LHRYGGGLME TETRDSSSAP PDLKQGVLPK APGDTLVASV 300 PSVPHSDVYH IVVPSQRSTI VIQRSGQRPH QKWKGPDKIS RIYGDWIDDI E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32360.1 | 1e-127 | C3H family protein |