PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022967184.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 787aa    MW: 87784.6 Da    PI: 6.1673
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022967184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.62.8e-2080135156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  XP_022967184.1  80 KKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 135
                     688899***********************************************998 PP
2START157.88.3e-502765013206
                     HHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS...............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv..............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     a +  +elvk+  ++ep+Wv++s  e g++ l  +e ++               +++ea r+ +vv+m++ +lv  +ld + +W e ++    ka
  XP_022967184.1 276 AVSSIAELVKMCRSTEPLWVRDS--ESGKDILNVEEHARMfpwplnlkqhlineFRTEATRDNAVVIMNSINLVDAFLDAN-KWMELFPsivaKA 367
                     677889*****************..66666666666655567777899999******************************.******99999** PP

                     EEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEE CS
           START  80 etlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtw 166
                      t++viss       g lqlm+aelqalsplvp R+  f+R+++q   +g+w+ivd  +d   +   ++s+ R ++ pSg++i++++ng+s+vtw
  XP_022967184.1 368 RTIQVISSSvsghasGSLQLMYAELQALSPLVPtREAHFLRCCQQnIDEGSWAIVDFPIDTFHDSL-QHSFPRYRRKPSGCIIQDMPNGYSRVTW 461
                     **********************************************************99999976.9*************************** PP

                     EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     veh + +++ +h++l+++v+sg+a+ga +w+a lqrqce+
  XP_022967184.1 462 VEHGEIEEKPIHQILNHFVHSGMAFGAHRWLAILQRQCER 501
                     **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    
MYGDCQVISS NMGTNINPNF NFISNFQHFS SILPKEENGV LRGKEDMESG SGSEQLVEEH  60
QGIIEMDSNN DNVLHQNLKK KRYHRHTARQ IQEMEALFKE CPHPDDKQRL KLSQELGLKP  120
RQVKFWFQNR RTQMKAQHDR ADNVILRAEN ETLKNENYRL QTALRNIICP SCGGQGILGE  180
PSLDEQQLRL ENARLRDQLE QVCSLTTRYT GRPIEGMPMQ PSLDLDMNIY SRQYTEAMVS  240
SSDMMSMPSM LPPEAAHFSK GDLLIDEEKT LAMDLAVSSI AELVKMCRST EPLWVRDSES  300
GKDILNVEEH ARMFPWPLNL KQHLINEFRT EATRDNAVVI MNSINLVDAF LDANKWMELF  360
PSIVAKARTI QVISSSVSGH ASGSLQLMYA ELQALSPLVP TREAHFLRCC QQNIDEGSWA  420
IVDFPIDTFH DSLQHSFPRY RRKPSGCIIQ DMPNGYSRVT WVEHGEIEEK PIHQILNHFV  480
HSGMAFGAHR WLAILQRQCE RIASLMARNI SDLGVIPSPE ARQNLMKLAQ RMIRTFSVNI  540
STSGGQSWTA LSESPDDTVR ITTRKIIEPG QPNGVILSAV STTWIPYPHY RVFDLLRDER  600
RRSQLEVLSN GNSLHEVAHI ANGSHPGNCI SLLRINVASN SSQHVELMLQ ESCTDQSGSL  660
VVYTTIDVDS IQLAMSGEDP SCIPLLPIGF SIVPVVGSTI DGHPSPPQED SVANSGCLLT  720
VGLQVLASTI PSAKLNLSSV TAINNHLCNT VHQINAALGS PANIENGNTI AEPNNAPAPA  780
PAPTPKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein