PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967015.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 288aa MW: 30660.3 Da PI: 9.5343

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	183.5	8.8e-57	98	266	4	153
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrel...kskkqsalsst 89 a C+dCGn+akk+C+++RCRtCCk rg +C+thvkstWvpa++rrerq + +a+ ++a +kr+r l +s+ +a+s++ XP_022967015.1 98 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDggssgsSSAGAKRPRVLipsQSTPPAAASHA 192 5679*******************************************9877665544444445666767788889998866545555566666 PP DUF702 90 klssaeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 + s a++++++et+s lP +v+++avfr rv++++ ge elaYq++v+igGhvfkG+LydqG+ XP_022967015.1 193 SASIATTSRSFETTSnhqdasfkksLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVV 266 7777777777777777888999999*********************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MLGLRDVLFL APTSTSDHHP SLPLHSPAAL GVSVGIFPLL AATPSLPPPP PPPPPNRTAE 60 EVSDRTRSSE NLKRTHDFGF GKGDSFIAGD KGDAGESSMA VCRDCGNRAK KECEYRRCRT 120 CCKGRGNHCS THVKSTWVPA SRRRERQMLV VMDGVATASG DGGSSGSSSA GAKRPRVLIP 180 SQSTPPAAAS HASASIATTS RSFETTSNHQ DASFKKSLPG QVRTPAVFRY HRVTAISSGE 240 GELAYQATVN IGGHVFKGFL YDQGVVDHKN GYPSLSHLHL ESGSHHRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	1e-46	SRS family protein