PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022966647.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 287aa    MW: 32802.5 Da    PI: 6.8013
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022966647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.1e-102470347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      WT+eE +++ +a +++  +   +W ++a++++ g+t  +++ ++q +
   XP_022966647.1 24 QWTPEENKRFENALALYDEDtsdRWLKVAAMIP-GKTIGDVVKHYQEL 70
                     6********************************.***********975 PP
2Myb_DNA-binding45.22.2e-14132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_022966647.1 132 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVSTRTPTQVASHAQKY 176
                      7*****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEFLSPASYL RNSNWLFQET KETQWTPEEN KRFENALALY DEDTSDRWLK VAAMIPGKTI  60
GDVVKHYQEL EEDVCDIEAG LIPIRGYDNR HSFTLERVDS SHGFDGLSHF YGAGFKTGTS  120
TTPEHERKKG IPWTEEEHRQ FLMGLKKYGK GDWRNISRNF VSTRTPTQVA SHAQKYFIRQ  180
LTGGKDKRRS SIHDITTVNL PDIKSPSGDS NRPPSMPTQL HQLSKMVGRA EQPFDWKCSN  240
QGIARVLEST TTTNGNMLDE AQLLDHNTNH GSALAPYYTI FEMQHYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-106MYB family protein