PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966379.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 352aa MW: 39093.5 Da PI: 6.8165

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3.1e-05	188	207	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022966379.1 188 FSCPVCFKTFNRYNNMQMHM 207 89*****************9 PP
2	zf-C2H2	15.5	4.8e-05	272	294	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_022966379.1 272 FTCRKCGKAFAVRGDWRTHEKNC 294 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MRVNVYGSFS LLQNFNQPFS LSSIPISMAD PYSNSLASVL KFSSHHHHFP QSQPSPSPSH 60 LTMSLNCLSY PYPDLGSGSG SGSGSPPPSS PPLREALPLL GLISPPEQRQ EQEEEDDGGD 120 NEGNDESVTV ALHIGLPSPS TAEMASSEID HSNNNDNLDD FGQSTKTLIK GQYWIPTPTQ 180 ILIGPTQFSC PVCFKTFNRY NNMQMHMWGH GSQYRKGPES LRGTQPTGML RLPCYCCAPG 240 CRNNIDHPRA KPLKDFRTLQ THYKRKHGLK PFTCRKCGKA FAVRGDWRTH EKNCGKFWYC 300 ICGSDFKHKR SLKDHVKAFG NDHAAYGVGR VDGFGDEEED DPASEVEQDN NE

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MRVNVYGSFS LLQNFNQPFS LSSIPISMAD PYSNSLASVL KFSSHHHHFP QSQPSPSPSH  60
LTMSLNCLSY PYPDLGSGSG SGSGSPPPSS PPLREALPLL GLISPPEQRQ EQEEEDDGGD  120
NEGNDESVTV ALHIGLPSPS TAEMASSEID HSNNNDNLDD FGQSTKTLIK GQYWIPTPTQ  180
ILIGPTQFSC PVCFKTFNRY NNMQMHMWGH GSQYRKGPES LRGTQPTGML RLPCYCCAPG  240
CRNNIDHPRA KPLKDFRTLQ THYKRKHGLK PFTCRKCGKA FAVRGDWRTH EKNCGKFWYC  300
ICGSDFKHKR SLKDHVKAFG NDHAAYGVGR VDGFGDEEED DPASEVEQDN NE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-131	C2H2 family protein