PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965798.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GeBP

Protein Properties

Length: 388aa MW: 43725.3 Da PI: 4.5886

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	82.8	4.8e-26	120	216	5	97
DUF573 5 rlwseeDeivlLqGlidfkaktgksps....ddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 +w++eDei lL+ +++f++++ sp+ +d afy+++k +i++ k+ql++K+rrL++K++ ++k++ g++p+f++ h++++f++s+ki XP_022965798.1 120 TVWTNEDEIQLLRSFLEFASENRISPHrlqqQDAAAFYRKIKPKIQLCCGKNQLLDKLRRLRRKYQITSSKIDCGEKPAFKSIHERSTFDISRKI 214 69*******************976533326************************************************************* PP DUF573 96 Wg 97 Wg XP_022965798.1 215 WG 216 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MTWPLSGWIF SSSSSSSMEE DQNSQPSDEH GISDDEPGTP LNEEDEEFQA DSYREDAHNN 60 GQNAAVSDGV SDETDAADLR QSKTNSFSPI DDRIPSVVAI PANAPNNIVT VAVPPRRRAT 120 VWTNEDEIQL LRSFLEFASE NRISPHRLQQ QDAAAFYRKI KPKIQLCCGK NQLLDKLRRL 180 RRKYQITSSK IDCGEKPAFK SIHERSTFDI SRKIWGRNSG KKQTSVEDSI LDEVLADINP 240 NFIEIQVKTE NLEEDESEEG EDYQQLTKRR RTAYLSGEAS NSNEIPARTN SIVDDIGKIS 300 GLVEEVARGC LSPLFKELIS NGWPPVGLAG RIPNCGGGEA GEERWRKQQE LEMEVYLKRL 360 ELVQEEIRVS LEQLRSKKEE SKNNDNNG

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MTWPLSGWIF SSSSSSSMEE DQNSQPSDEH GISDDEPGTP LNEEDEEFQA DSYREDAHNN  60
GQNAAVSDGV SDETDAADLR QSKTNSFSPI DDRIPSVVAI PANAPNNIVT VAVPPRRRAT  120
VWTNEDEIQL LRSFLEFASE NRISPHRLQQ QDAAAFYRKI KPKIQLCCGK NQLLDKLRRL  180
RRKYQITSSK IDCGEKPAFK SIHERSTFDI SRKIWGRNSG KKQTSVEDSI LDEVLADINP  240
NFIEIQVKTE NLEEDESEEG EDYQQLTKRR RTAYLSGEAS NSNEIPARTN SIVDDIGKIS  300
GLVEEVARGC LSPLFKELIS NGWPPVGLAG RIPNCGGGEA GEERWRKQQE LEMEVYLKRL  360
ELVQEEIRVS LEQLRSKKEE SKNNDNNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	8e-33	GeBP family protein