PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965734.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 449aa MW: 49958.8 Da PI: 7.2418

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.5	2.2e-35	45	189	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022965734.1 45 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdfqg 137 799**********.99***9987775553333333766646******.555666799**************7555555544 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022965734.1 138 GGETRWHKTGKTRPVMA-SGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 189 33778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MKSSLGSITS SDLIDAKLEE HQKCGSKQCP GCGHKLEAKP DWLGLPAGVK FDPTDQELIE 60 HLEAKVEAKN DIKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDFQGGGE TRWHKTGKTR PVMASGRQKG CKKILVLYTN FGKNRKPEKT 180 NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSSAE KGGGGGIGEV TGDNVVLSSR 240 RESGSGSCSS SREMATPRDE MSPVGGSGGL CPPPHIAVTY GGLDHIQQFK ADHFGFGSFR 300 RNFDEVGIGE ASTTRESAPT EDIGDHHRHH HLQRQHHHPM ATTAFQITRP SNPISTIICP 360 PPLHHSSIIL DHDSYRVSPL ILQNESFQQQ QQHHHKLGGR SASGLEELIM GCTSSNIKEE 420 STMGSNAQEA AEWMKYSPFW PDPDNPNHH

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MKSSLGSITS SDLIDAKLEE HQKCGSKQCP GCGHKLEAKP DWLGLPAGVK FDPTDQELIE  60
HLEAKVEAKN DIKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDFQGGGE TRWHKTGKTR PVMASGRQKG CKKILVLYTN FGKNRKPEKT  180
NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSSAE KGGGGGIGEV TGDNVVLSSR  240
RESGSGSCSS SREMATPRDE MSPVGGSGGL CPPPHIAVTY GGLDHIQQFK ADHFGFGSFR  300
RNFDEVGIGE ASTTRESAPT EDIGDHHRHH HLQRQHHHPM ATTAFQITRP SNPISTIICP  360
PPLHHSSIIL DHDSYRVSPL ILQNESFQQQ QQHHHKLGGR SASGLEELIM GCTSSNIKEE  420
STMGSNAQEA AEWMKYSPFW PDPDNPNHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-139	NAC family protein