PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022965733.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 449aa MW: 49958.8 Da PI: 7.2418 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 113.5 | 2.2e-35 | 45 | 189 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022965733.1 45 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdfqg 137 799************.99*******9987775553333333766646**********.555666799******************7555555544 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022965733.1 138 GGETRWHKTGKTRPVMA-SGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 189 33778************.9999**********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence |
MKSSLGSITS SDLIDAKLEE HQKCGSKQCP GCGHKLEAKP DWLGLPAGVK FDPTDQELIE 60 HLEAKVEAKN DIKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDFQGGGE TRWHKTGKTR PVMASGRQKG CKKILVLYTN FGKNRKPEKT 180 NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSSAE KGGGGGIGEV TGDNVVLSSR 240 RESGSGSCSS SREMATPRDE MSPVGGSGGL CPPPHIAVTY GGLDHIQQFK ADHFGFGSFR 300 RNFDEVGIGE ASTTRESAPT EDIGDHHRHH HLQRQHHHPM ATTAFQITRP SNPISTIICP 360 PPLHHSSIIL DHDSYRVSPL ILQNESFQQQ QQHHHKLGGR SASGLEELIM GCTSSNIKEE 420 STMGSNAQEA AEWMKYSPFW PDPDNPNHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-139 | NAC family protein |