PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965316.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 522aa MW: 57445.1 Da PI: 4.6589

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965316.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.1	2.2e-36	36	127	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++ ++sws+++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_022965316.1 36 FLSKTYDMVDDPATDAVVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEDFLRGQKHLLKS 121 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_022965316.1 122 ITRRKP 127 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MDVTANGGDS GLASRSDSSH PTVPAPITNV NAPPPFLSKT YDMVDDPATD AVVSWSSTNN 60 SFVVWNPPEF ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANED FLRGQKHLLK 120 SITRRKPVHG HSQQQSQQSH GQSTSVGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ 180 QQQTTDNQLQ TMVQRLQGME QRQQQMMSFL AKAVQSPGFL AQFVQQQNES TRRISEANKK 240 RRLKQDGIVE SEHSTVPDGQ IVKYQPLMNE AAKTMLRQIM KIDTSQSEPV NLNTDSFLIN 300 DGLQSSCAAM DNGNSSSSIS GVTLQEVPPT SGPSSFNSAA SGVAPHGPST AISEIQSLPQ 360 ATTSDKVSTS PFAVNAVRGP GAREASSLSV SDTDVIMPEL SQLSEMVSEN IIDVPEVDYR 420 VPEAGNSSFI SPSLLDVDGT IPLEIDSMSP DADIDALLAN SNFWDDLLVQ SPCQEEEIDF 480 MVGGGLPKTN DMQPVENVWD KSKHVDKLTE QMGLLTSEIK RV

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MDVTANGGDS GLASRSDSSH PTVPAPITNV NAPPPFLSKT YDMVDDPATD AVVSWSSTNN  60
SFVVWNPPEF ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANED FLRGQKHLLK  120
SITRRKPVHG HSQQQSQQSH GQSTSVGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ  180
QQQTTDNQLQ TMVQRLQGME QRQQQMMSFL AKAVQSPGFL AQFVQQQNES TRRISEANKK  240
RRLKQDGIVE SEHSTVPDGQ IVKYQPLMNE AAKTMLRQIM KIDTSQSEPV NLNTDSFLIN  300
DGLQSSCAAM DNGNSSSSIS GVTLQEVPPT SGPSSFNSAA SGVAPHGPST AISEIQSLPQ  360
ATTSDKVSTS PFAVNAVRGP GAREASSLSV SDTDVIMPEL SQLSEMVSEN IIDVPEVDYR  420
VPEAGNSSFI SPSLLDVDGT IPLEIDSMSP DADIDALLAN SNFWDDLLVQ SPCQEEEIDF  480
MVGGGLPKTN DMQPVENVWD KSKHVDKLTE QMGLLTSEIK RV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	245	NKKRRLKQ
2	239	244	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-140	HSF family protein