PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022965141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 278aa MW: 31167.1 Da PI: 8.0826 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.6 | 4.9e-19 | 115 | 169 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q +Le+ F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k XP_022965141.1 115 RKKLRLTKDQSAVLEDSFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 169 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 130.1 | 8.6e-42 | 115 | 204 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k+q+++LE+sF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+kev+eLr +l XP_022965141.1 115 RKKLRLTKDQSAVLEDSFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLQKEVQELR-AL 204 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MMAGKDDGLG LSLGLSLESQ PHRHLQLNLM PSWTNDASSD RTSETGRSLL RGIDVNRIPP 60 SMADCEEEAA MSSPNSTVSS VSGKRSERET NGEDLDGDRD CFRGISDEED GETSRKKLRL 120 TKDQSAVLED SFKEHNTLNP KQKLALAKQL GLRPRQVEVW FQNRRARTKL KQTEVDCEFL 180 KRCCENLTDE NRRLQKEVQE LRALKLSPQF YMHMTPPTTL TMCPSCERVA VPTSTSAPTT 240 VTRVGQAQAQ PHHARPIHLN PWASAIPARP FNALHPRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 114 | 120 | SRKKLRL |
2 | 164 | 172 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 5e-84 | HD-ZIP family protein |