PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965079.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 383aa MW: 42620.9 Da PI: 8.738

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	25.7	3.3e-08	50	85	5	40
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvk 40 + +C+ CGn a+ C +e C+ CC + C+ hv XP_022965079.1 50 KPKCRVCGNVARSRCPYESCKSCCARNQNPCHIHVL 85 568*******************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MAAPSPTVSN NSSDTATTTA SAVTVNAAVS SNHLANRTAT PPKTLRGLNK PKCRVCGNVA 60 RSRCPYESCK SCCARNQNPC HIHVLKANAT FTDKTPTLSS PLFDKQSADP SSSGTSHRVA 120 SLRQLSSNFS QFNNVQIPLR SRKPLTRKDA AAINEWRFSK LREFRERHIE AENEAFDRYM 180 KNVNLLEEVF SMKSMVDGSL KDGPSNFATE GTEEVIPGLK LSLGSGSDDS RKRIREIVED 240 GLMKLKKVEA TDNDDEVTDQ VESGKVADQT NRNDGWTTVK GWHAKRARAL GDLIDKLNKA 300 RNEEDLKSCL AMKHQLFNQH ITSSQTESEE TDMPKEQVIK KDLDSRKELG YSLPKLINKT 360 IIDQETLNRI DAHFSSLKQI DNL

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MAAPSPTVSN NSSDTATTTA SAVTVNAAVS SNHLANRTAT PPKTLRGLNK PKCRVCGNVA  60
RSRCPYESCK SCCARNQNPC HIHVLKANAT FTDKTPTLSS PLFDKQSADP SSSGTSHRVA  120
SLRQLSSNFS QFNNVQIPLR SRKPLTRKDA AAINEWRFSK LREFRERHIE AENEAFDRYM  180
KNVNLLEEVF SMKSMVDGSL KDGPSNFATE GTEEVIPGLK LSLGSGSDDS RKRIREIVED  240
GLMKLKKVEA TDNDDEVTDQ VESGKVADQT NRNDGWTTVK GWHAKRARAL GDLIDKLNKA  300
RNEEDLKSCL AMKHQLFNQH ITSSQTESEE TDMPKEQVIK KDLDSRKELG YSLPKLINKT  360
IIDQETLNRI DAHFSSLKQI DNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	4e-85	SRS family protein