PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027185750.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 212aa    MW: 23188.1 Da    PI: 7.9906
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027185750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.00052107129123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg+ F     L  H+r+H
  XP_027185750.1 107 HECSICGQEFAVGQALGGHMRRH 129
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MGMNMMNVGT KRAREPDQFD SITTMANCLM LLSRAGEFEA LNIFHHNNSS DNSHNPSRVF  60
ECKTCNRQFP SFQALGGHRA SHKKPKLGAD LSLQSQVQTS PPKPKTHECS ICGQEFAVGQ  120
ALGGHMRRHR AAMNEEIGYH QSPVSSLSSG QQHQSPVSSL SSGQHEPVVQ KSNTSSGRVC  180
CLDLNLTPLE NDLEFRLGKV VAPPVDCFLQ GC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.16e-41C2H2 family protein