PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027185582.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 324aa MW: 36512.8 Da PI: 6.9574 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.5 | 6.7e-34 | 185 | 242 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++Cpvkk+vers +dp +v++tYeg+Hnh+ XP_027185582.1 185 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCPVKKRVERSFQDPAIVITTYEGTHNHH 242 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MSEDFRDLYY HQPYQDDRHG SINMSANFPF PHHMASSSLT DNSSVLNSSH MLDPAYMSFT 60 DCLLQGSSDQ GTFARAFGLS PSSSEAFSLV KDEQKPVVIE VAGDHQACAS HETPVTPNSS 120 ISSSSTEAVG DEDSNKGKKD KQLKETQEED ALSPKKENKP KKKGEKKERQ PRFAFMTKSE 180 VDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TTQKCPVKKR VERSFQDPAI VITTYEGTHN 240 HHVPATLRGN VAGMLPPSML TPMPLGVPNF PQELIVQMPQ FYSQASANTS SMYQQNLTPL 300 QQLQFHDYGL LQDIVPSMFF KQEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 3e-64 | WRKY family protein |