PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027185414.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 247aa    MW: 26852.9 Da    PI: 6.3075
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027185414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002695117123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_027185414.1  95 FSCNYCRRKFYSSQALGGHQNAH 117
                     89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MKAPTINLES EEDSEVSSQV ASNISTQEVS PGPSKESITS SPSLTHSLDL ERDPRPVTLD  60
LTLGFNSSDT DSKGVGENNG EVFPHPPTPG VSRVFSCNYC RRKFYSSQAL GGHQNAHKRE  120
RTLAKRAMRM NMISDRYASL ASLPLHGSAF RSLGIEAHAS VHQPIMSSDR PLHAIRGGAK  180
FEQGYFGMPV YMEDDEVEMY WPGSFRQVEG VASNLALNSG QSSSINFVAV APPPRADSST  240
PDLNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.15e-52C2H2 family protein