PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183508.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HB-other
Protein Properties Length: 363aa    MW: 41176.3 Da    PI: 4.8021
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox34.82.8e-11296344553
                     SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                      +++k ql++Le+++++++ ps +++  + + ++L++++V  WF  +Ra
  XP_027183508.1 296 KRIKKAQLDTLERVYNRTKRPSNAMISNIVHLTNLPKKRVVKWFEDKRA 344
                     5699********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MGAPTAAWLP HMSSFVALKP HCCLNKKPLF VDTKSIRTSF ILPRQPFSSS SILTFARRRG  60
GHQASSSPVK SKKQKIKEQT FGSKSTQEDE DDDAFEALFR QLEEDLKNDN LSSENGDDDD  120
EISEEDLAKL ERELEEALKD DELFGALDLV GDGKTEDESD EDEKEEENED DNTANYHVED  180
LEDDDNDEEM PVKLKNWQLK RLAYALKNGR RKTNIKSLAA DLCLDRAVVL ELLRDPPPDL  240
LMMSAALPDK PVSTVVEPVN KLKEASPLEM TPVTTKAEAE VKVPVHVMQS NWSAKKRIKK  300
AQLDTLERVY NRTKRPSNAM ISNIVHLTNL PKKRVVKWFE DKRAEDGIPE HRLPYERSAS  360
TFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.12e-56HB-other family protein