PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183485.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 228aa    MW: 25424.9 Da    PI: 4.6318
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-182473255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  XP_027183485.1 24 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 73
                    8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MFKPSCSSSA PASSSITSQE AQVKYKGVRK RKWGKWVSEI RLPNSRERIW LGSYDSAEKA  60
ARAFDAALFC LRGKNATFNF ADIPPDLVGG RTLTPAEIQA VASEYANQYG NKEKQQQQGE  120
GLIGEKEDDP LQFDQDTSPI SSNSDGALQN MDWSFLGMLE PNGAATGATS NAPDYDLMLS  180
SLDNLHEDMY MTPHVGTKVD VDHNFNGQHE DYQHLDENYS HQSFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12632KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-44ERF family protein