PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183442.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 287aa    MW: 31871.6 Da    PI: 7.4622
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.82.9e-3095153259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s +dp++++itY+ eHnh+
  XP_027183442.1  95 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCIARKQVEQSCTDPSIFVITYTAEHNHS 153
                     79*************************998****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MLTDELQDLY KPFYTVSHSS PAQNSPVGPT TPSDSVSVCK ETKEEPEEVH QQKVKVHGDQ  60
PPAATATSTY MPKYKRRKNQ QKRVVLQSTA KDLSSDKWAW RKYGQKPIKG SPYPRSYYRC  120
SSSKGCIARK QVEQSCTDPS IFVITYTAEH NHSQPTRKNA LAGTVRHKFS TTKTPTGSNS  180
KAAKKGNSGG CSPNPGLVLS SPETRLLADE EESQERNIER EIKDENDGQI VDVKPDNGVL  240
IPEVMFDDDF FSGICDWNAF MSELGDGRRL AETVSSDSDL LQPIIPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.11e-32WRKY family protein