PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027183442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 287aa MW: 31871.6 Da PI: 7.4622 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.8 | 2.9e-30 | 95 | 153 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s +dp++++itY+ eHnh+ XP_027183442.1 95 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCIARKQVEQSCTDPSIFVITYTAEHNHS 153 79*************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MLTDELQDLY KPFYTVSHSS PAQNSPVGPT TPSDSVSVCK ETKEEPEEVH QQKVKVHGDQ 60 PPAATATSTY MPKYKRRKNQ QKRVVLQSTA KDLSSDKWAW RKYGQKPIKG SPYPRSYYRC 120 SSSKGCIARK QVEQSCTDPS IFVITYTAEH NHSQPTRKNA LAGTVRHKFS TTKTPTGSNS 180 KAAKKGNSGG CSPNPGLVLS SPETRLLADE EESQERNIER EIKDENDGQI VDVKPDNGVL 240 IPEVMFDDDF FSGICDWNAF MSELGDGRRL AETVSSDSDL LQPIIPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 1e-32 | WRKY family protein |