PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183331.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 260aa    MW: 28899.8 Da    PI: 5.3638
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-1756109156
             AP2   1 sgykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     + y+G+r+++ +++  Wv+e+r+p   +k+ r++lg++ tae+Aa+a++ a+++l+g+
  XP_027183331.1  56 PVYRGIRRRR-WNSnkWVCELREP---NKQSRIWLGTYPTAEMAARAYDVAALALRGH 109
                     68****9777.88888*******8...336**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDASSSCSDP HPFGSLSDVS PTTAQRAINS DEEIILSSSR PKKRAGRKKF KETRHPVYRG  60
IRRRRWNSNK WVCELREPNK QSRIWLGTYP TAEMAARAYD VAALALRGHL ACLNFADSVW  120
RLPVPASRDA KDIRKAAAEA AEMFRSQEEC DNSNSEASAS GSGSESGDHH HHHQVGEEIG  180
DIQHDNNEVS SFGHGEALQK NGEESTSSMF MDDEALFDMH GLMVNMAEGL LLSPPHCLGE  240
SYSFDEVESD AEVPLWSYTF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14765RKKFKETRHPVYRGIRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-45ERF family protein