PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027183229.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 512aa MW: 56341.5 Da PI: 7.137 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 99.9 | 1.5e-31 | 132 | 236 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 f+kv tpsdv+k++rlv+pk++ae++ ++ +e++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ + XP_027183229.1 132 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvGElGK 226 89***************************966778999*************************************************66699999 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +l++ ++r+ XP_027183229.1 227 DRLFIDWRRR 236 9999999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence |
MNFMAPRQPG GGGGYYEEDS SRATRPFSQP SSAAAATPQH HHHQYLQQRD LLVPPSYNHH 60 QPRGPWDDRR VSFRGYSCGG ASQLDLMAMD SSSSPTTNGS SCSNIVEDAD EPRVGGGNTT 120 SASLIIEREH MFDKVVTPSD VGKLNRLVIP KQHAEKYFPL DSSTNEKGLL LNFEDRNGKP 180 WRFRYSYWNS SQSYVMTKGW SRFVKEKKLD AGDIVSFQRG VGELGKDRLF IDWRRRPDAP 240 DHPQLPPSMS TASFSQLLPH HQYSFRHPWN HPFYLQHHQQ QQNPRDHYQL LQLNNAATGV 300 GINNNPNPSH PHHLSNNYAY GNVMTGNPCS GPFIYLRSAA AARPHPVNLG IGTVQMVQKG 360 GGGSVGLNPE EVMVEEGGEG EEPMVFESVP LVQGKAAAKR LRLFGVNMDC PISESSSEDQ 420 EDDNCDILVL PSTAVAHPTM PSQFPHLCSS PPPPPPASSS SSSSSSSSST CPLQLRPYNY 480 ASRPPLHTMP SNNKSSSSDS KGKASMSLDL DI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46870.1 | 3e-70 | B3 family protein |