PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027183045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 30270.8 Da PI: 7.4611 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.4e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l++ +G+g +W t +++ g++R++k+c++rw++yl XP_027183045.1 14 RGPWSPEEDQILKKHLLDYGTGgNWITLPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.6e-15 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++T+eEd+l+ + ++G++ W+ Ia+ ++ gRt++++k++w++ XP_027183045.1 69 GPFTPEEDDLICTLYSKMGSR-WSIIASQLP-GRTDNDVKNHWNS 111 89*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MGRTPCCDKT KVKRGPWSPE EDQILKKHLL DYGTGGNWIT LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGP FTPEEDDLIC TLYSKMGSRW SIIASQLPGR TDNDVKNHWN SKLKKKQLAA 120 SIRKPASNTA NNNSSRPDSF TSTTSTTTPY SLETQAGAFH PKFSAHLSNL STEDYTDISV 180 GTEGSKVCSS SSKTIEYMSS SSQAQEDSII SESTSFGTVT NTINNSMPWL DDYGAIDRGL 240 PMEMTGTAAY SYEILSGIWA QETVLEALHD PYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 5e-65 | MYB family protein |