PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183021.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 236aa    MW: 25898.8 Da    PI: 5.2522
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000117294123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_027183021.1 72 YTCTFCRREFRSAQALGGHMNVH 94
                    9********************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MAAELGLLSL TQLQKLAQFQ PPQPQPQTSS ATTSWMWNPK QVAEDEDDSW EVRAFEQDTG  60
NINGTTWPPR SYTCTFCRRE FRSAQALGGH MNVHRRDRAR LHQAPPGMNN PTSPSTASST  120
LIIPAQEFIT NGGLCLVYSL ANPNGTVLTP TPMNSCMESP SALLSVSSFP TNTLISPCPY  180
TYPATPHSMN SSISQSSNTE RSASNSNENN ILDNIGQNRK DSAIEELDLE LRLGRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-39C2H2 family protein