PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027182874.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 310aa    MW: 34199.6 Da    PI: 9.656
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027182874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-19108158256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  XP_027182874.1 108 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 158
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MARVQENTVP LAFEDGASIR SSLSHLILTG GANTLDSILS YGQQPNPVAD SVFEPLGSSV  60
YLKQRDLLHK FYEENKGNSS AVSRIRLTNP LQNSVYAQSF MHPCKKKLYR GVRQRHWGKW  120
VAEIRLPQNR MRVWLGTYDT AEAAAYAYDR AAYKLRGEYA RLNFPNLRDP SKLGFGDGAR  180
LNALKNAVDA KIQAICQKVK REKANKKAKK SSGGSGDATK VKESKKEMKI LDTSSSSSSL  240
PPLGNDNSWS SELVSPTPSV SEDGIWKGEN SSTSISGEFP VGPMGSEFED CSLARFPSFD  300
PDLIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.17e-57ERF family protein