PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027182821.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

ERF

Protein Properties

Length: 376aa MW: 41595.9 Da PI: 5.7795

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027182821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	62.3	1.1e-19	159	209	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+W+AeIrdps r r +lg+++taeeAa +++a+ +l+g XP_027182821.1 159 KKFRGVRQRP-WGKWAAEIRDPS----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 209 59******.******84....34***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MDQQRMQDML TNKKGVKYTE HRKQTTMVRP SPLLPSLAGR TRKSPDMNAV KPRVVRISVT 60 DADATDSSSD EDEEAFKRRH RVKRFINEVK IETFRDNGDG NVNACTSAGN VNSVWRSRGS 120 AAPAAAGNGT STTNKKRKKS SGGVGNGKQT RVAEGSNVKK FRGVRQRPWG KWAAEIRDPS 180 RRVRLWLGTY DTAEEAAMVY DHAAIQLRGP DALTNFATPP ARSASPPAPE SATCSGYNSG 240 EESHNNQRSP KSVLRFASTS NSNEEAEAES CLPSPLHEEV VGIGKERRDC CGEEMCVSEN 300 FSHYSLIPED LRFEFEDPVV DFSDLFEDNS NIFEYARNFD NTFVDSSESV EFGSAMPDDF 360 FSDLGDIFGK DPLVAL

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MDQQRMQDML TNKKGVKYTE HRKQTTMVRP SPLLPSLAGR TRKSPDMNAV KPRVVRISVT  60
DADATDSSSD EDEEAFKRRH RVKRFINEVK IETFRDNGDG NVNACTSAGN VNSVWRSRGS  120
AAPAAAGNGT STTNKKRKKS SGGVGNGKQT RVAEGSNVKK FRGVRQRPWG KWAAEIRDPS  180
RRVRLWLGTY DTAEEAAMVY DHAAIQLRGP DALTNFATPP ARSASPPAPE SATCSGYNSG  240
EESHNNQRSP KSVLRFASTS NSNEEAEAES CLPSPLHEEV VGIGKERRDC CGEEMCVSEN  300
FSHYSLIPED LRFEFEDPVV DFSDLFEDNS NIFEYARNFD NTFVDSSESV EFGSAMPDDF  360
FSDLGDIFGK DPLVAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	139	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23750.1	3e-40	ERF family protein