PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027182489.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 191aa MW: 21580.8 Da PI: 9.5827 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.8 | 3.4e-31 | 112 | 170 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+ +prsYYrCt+++C+vkk+++r ++d+++v++tYeg Hnh+ XP_027182489.1 112 LDDGYKWRKYGQKAVKNCAHPRSYYRCTHHTCNVKKQIQRLSKDTSIVVTTYEGIHNHP 170 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MFMEEGSPIA AGNTVPYLFT PTLSSTAPLY PPLLMNQSMQ SPQIASDMDW ATILSSTAVN 60 CEQKPTSPCL SMTSRNAREG DNLDKNKVKP GKTKKSVPPR IAFHTRSTED ILDDGYKWRK 120 YGQKAVKNCA HPRSYYRCTH HTCNVKKQIQ RLSKDTSIVV TTYEGIHNHP CEKLMETLSP 180 LLKQLQFLSR F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64000.1 | 2e-59 | WRKY family protein |