PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027181997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 25379 Da PI: 6.8889 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1e-18 | 138 | 188 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ + r++lg+f+ta +Aaka++ a+ k++g XP_027181997.1 138 HYRGVRRRP-WGKYAAEIRDPVR---KgSRVWLGTFDTAMDAAKAYDSAAFKMRG 188 7********.**********643...24*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MSADESTTLE LIRQHLLGDF TSNDTESFLN NLSLCFADVC NDDDHNKTTI SSGKPDPTTS 60 ESDSSSFISD PSKQPDTPVS RHLKLEPDFF DFETEPTILK LEPVSGSPYS DNPFRPASAS 120 VKSDPFANGS GGVRDGRHYR GVRRRPWGKY AAEIRDPVRK GSRVWLGTFD TAMDAAKAYD 180 SAAFKMRGRK AILNFPLEAG KSSPPVNSRR KSRRESSVAV DHGHHQVSET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61590.1 | 1e-22 | ERF family protein |