PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027181642.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 328aa MW: 36983.4 Da PI: 4.7723 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.8 | 1.6e-15 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+++ + +tWkt+++ g++R++k+c++rw +yl XP_027181642.1 11 KGAWSKEEDQILIHYMGNHDLETWKTVSEQAGLNRCGKSCRLRWTNYL 58 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.1e-15 | 64 | 107 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ ++ + +++G++ W++Ia++++ gRt++++k++w++ XP_027181642.1 64 RGEFSADEEATIISLQREHGNK-WSRIAAHLP-GRTDNDIKNFWNT 107 899*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MATSPENGVK KGAWSKEEDQ ILIHYMGNHD LETWKTVSEQ AGLNRCGKSC RLRWTNYLKP 60 GIKRGEFSAD EEATIISLQR EHGNKWSRIA AHLPGRTDND IKNFWNTRLK KKLLRRVINP 120 TTHKPIPDFN LLNFADQAQL LSVSDNPNLE AALANNANEL IKNQVKALQN MLQIINPNPL 180 QYFQGNLDLY ELIQLNGFFD RTTTDLALNP LQPQSMIAGF SNESPVLLNQ QQPYTSNSLP 240 CFDGETIPGP VLDDNIIHSD NICNSEYSLP SLVSAAPESL TVKQMESFYV SAEAPEQYNV 300 FDAWENPVDI DEASGSFWKD NFRFPADG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 4e-53 | MYB family protein |