PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027181554.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Dof
Protein Properties Length: 326aa    MW: 35363.6 Da    PI: 8.5455
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027181554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.71.4e-3972133263
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                     ke+a++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss
  XP_027181554.1  72 KEQAMNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 133
                     7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MMVLKDSAKV PTCSSSPFKA FACFALFLCL MRKVETQEIV VKPMEEIVVP NGSTTSCSKP  60
GSSLERKVRP QKEQAMNCPR CNSTNTKFCY YNNYSLSQPR YFCKTCRRYW TEGGSLRNIP  120
VGGGSRKNKR SSSSSSSSVS SSKKLPDLIP PSSHQNPKIH EGQDLNLGFS STHDFKTITE  180
LIQVPNFDNN NKENLTSSSS NSTTTSCHLS ALELLTGITP IRGLSSFVPM PITTDPTVVY  240
SSSGGFQLPE FKPSLSFSLD GLGSSGGYVN LHGVQESSGG RPLFPFEDLK QVSGTTSTDV  300
DQQNREQHAD STGYWTGVLG GGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46590.24e-43Dof family protein