PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027181436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25670.8 Da PI: 9.636 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.8e-18 | 14 | 63 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr++ +g+Wv+eIr+p kr++lg+f tae Aa+a+++a+ ++g XP_027181436.1 14 KFRGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEAAARAYDQAAILMNG 63 89****999.**********8.....335**********************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MIQRTTTNMV PSRKFRGVRQ RQWGSWVSEI RHPLLKKRIW LGTFETAEAA ARAYDQAAIL 60 MNGQNAKTNF PVVKENPNEP SRKTSTDHQD SRPLSLTAPP AESLSEILSA KLKKCCKDPA 120 PSLTCLRLDN SQIGVWQKRT GRHSGSNWVL KVELGKNKDH QNSTQQASLC SSSSTTTATT 180 TSSSSGSSTT SSGTAAIDQH ETGVGMDEEN RVAMQMVEEL LNWNCPPPYL TNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25390.2 | 3e-57 | ERF family protein |