PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027180912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 203aa MW: 22586.6 Da PI: 8.9094 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.1e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++ + + Wkt+a + g++R++++c++rw++yl XP_027180912.1 15 KGAWTAEEDRKLAEYIETHSAKKWKTVATKSGLNRCGESCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.5e-17 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+ +++E++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l XP_027180912.1 68 KGNISPDEEDLIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 6889******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MAPKQEGSAI RFCRKGAWTA EEDRKLAEYI ETHSAKKWKT VATKSGLNRC GESCRLRWLN 60 YLRPNIKKGN ISPDEEDLIV RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKIYST 120 KITDGTTGAP AAPPPTTMAK VQVEVQATHH HESQADNTEL SFGVGDSLDD SVEGTSAMDC 180 IIKFLELDEK PPTPPPAGPK PLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 1e-51 | MYB family protein |