PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179691.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 369aa    MW: 41595.8 Da    PI: 5.2126
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000462762993054
                     C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  30 askapskKlsKaeiLekAveYIksL 54 
                     + +++s K + a++L++A+ YI+ L
  XP_027179691.1 276 P-SNSSNKTDTASVLTEAIGYIQFL 299
                     2.67999****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MYPDHSSRDS QFLNKIIMES ANFNQHHDQP LQQQEHQQQQ QQLIYPAFSS STSSSATLVS  60
TVNGQWNPSM VLEGDDFSRY MNEILPNSRD YFWPKSINSV PSVKKSLLEV DHEDSNCRDF  120
RSYLHHPLPS KGGINPGLFL KSDDMNGSIL KNSYIKNGQQ DVSIDLNENL WIGSFSHSHI  180
NQKLSTNESY SNGDDFASFV GLPPSPPNFM SSGTSESTDQ HQLYASTSLL PTSQSLPLAT  240
EILNCRNFDE GRRTHESFEE RMSSDYCHLR QSSDSPSNSS NKTDTASVLT EAIGYIQFLR  300
DQIQTLSMAY LKSSRSSKSC RATRGQEVLS MKEDEDEEER AMHDLRSRGL CLVPLAFTSY  360
VCCSYNGSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-19bHLH family protein