PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179449.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

DBB

Protein Properties

Length: 155aa MW: 17077.3 Da PI: 5.2042

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.6	1.1e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC++C ++ H XP_027179449.1 4 LCDVCESAAAILFCAADEAALCRSCDDKVH 33 7*************************9998 PP
2	zf-B_box	27.9	4.9e-09	52	86	2	36
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 + + C+ +e+ ++ ++Ce +++ lC +C + H g XP_027179449.1 52 DVPQCDICENAPAFFYCEVDGSSLCLQCDMIVHVG 86 5689**************************99955 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRSCDD KVHMCNKLAS RHVRVGLANP SDVPQCDICE 60 NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HARYLLLRQR VEFPGDKPAR LEEPATQTLD 120 QDGSTDGHAQ VETQMIDLNM KPNRLHGQAS NNQEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	3e-79	DBB family protein