PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179183.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

GeBP

Protein Properties

Length: 405aa MW: 45561 Da PI: 4.4246

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179183.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	99.4	3.2e-31	186	280	5	98
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWgs 98 r+w eeD i lLq +idfk+++g++ps+++ afy+f++++++f++s++q+ eKirrL+ Kf ++++k k g++ +f+k h+ ++f+lskkiWg+ XP_027179183.1 186 RVWGEEDVIDLLQSMIDFKDEKGVDPSSNMPAFYDFARGKLQFEFSNTQIYEKIRRLRIKFFNNMEKyEKGGEDLVFHKRHEAETFDLSKKIWGK 280 9***************************************************************988899*******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MAPKNPISDQ QPPPPELEES SESSSEEEES VSNKHIPPPE PETMKESSEQ EEEESSEEEG 60 EEEGSEEEEE EVGESDVEEE QDKQKSSQIL PDVQKQTTPP PQFPAYSGKE GEEDEESENS 120 IDSPSASDFR IKVVTPPKPT SKDSKSISKH PFEAEKDDES DLRGKKKAKV NAEEFRKDSS 180 SGGAGRVWGE EDVIDLLQSM IDFKDEKGVD PSSNMPAFYD FARGKLQFEF SNTQIYEKIR 240 RLRIKFFNNM EKYEKGGEDL VFHKRHEAET FDLSKKIWGK GGDGMINKGV DKNVDGKSNN 300 GYNGKAKKGG KTVRSVDKNA VKELGKDDHE GDFESKYPFL SHSIDMDVGG GFLRENISLI 360 GDAKAKDLEG KWKKFREAEV EVLLMKMDLM KEHTKLVLEG MKESN

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MAPKNPISDQ QPPPPELEES SESSSEEEES VSNKHIPPPE PETMKESSEQ EEEESSEEEG  60
EEEGSEEEEE EVGESDVEEE QDKQKSSQIL PDVQKQTTPP PQFPAYSGKE GEEDEESENS  120
IDSPSASDFR IKVVTPPKPT SKDSKSISKH PFEAEKDDES DLRGKKKAKV NAEEFRKDSS  180
SGGAGRVWGE EDVIDLLQSM IDFKDEKGVD PSSNMPAFYD FARGKLQFEF SNTQIYEKIR  240
RLRIKFFNNM EKYEKGGEDL VFHKRHEAET FDLSKKIWGK GGDGMINKGV DKNVDGKSNN  300
GYNGKAKKGG KTVRSVDKNA VKELGKDDHE GDFESKYPFL SHSIDMDVGG GFLRENISLI  360
GDAKAKDLEG KWKKFREAEV EVLLMKMDLM KEHTKLVLEG MKESN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	1e-20	GeBP family protein