PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027179015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 512aa MW: 52893.2 Da PI: 7.9566 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.2 | 1.4e-05 | 67 | 89 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_027179015.1 67 FVCEICNKGFQRDQNLQLHRRGH 89 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.2 | 0.0012 | 143 | 165 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_027179015.1 143 WKCDKCSKKYAVQSDWKAHSKIC 165 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence |
MPADMDNSSV MNDSTASGDA SASSSGNQAA APPTSSAKKK RNLPGMPDPD AEVIALSPKT 60 LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRSS KEVKKRVYVC PELTCVHHDP 120 SRALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HSKICGTREY KCDCGTLFSR 180 RDSFITHRAF CDALAEESAK AQTVEALPAP TADDEEPKLQ TLASSSPPPS VAAQPPPPAA 240 LASSALPVQN PEGPENPKQS PAPPQILEET SVVTSLTGSC GSSSSSSSHG STSSSVFASL 300 FASSTTSGSM QSQTPEFTDL FRAVARPENA SEVVASSSTE PISLCLATSH GSSIFGTAGQ 360 ERRQYAPAPQ PAMSATALLQ KAAQIGAAAT NASLLRGFGI VSSASASSGQ QEWSGRGIES 420 DSASLAAGLG LGLPCDGGSS LKELMLGTPS VFGPKHTTLD LLGLGMAAGG GPSGGFSALM 480 TSIGGGLDVA AAAAASFGGS GEYSGKDMGR GS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-106 | C2H2 family protein |