PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027178525.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 385aa    MW: 42766.3 Da    PI: 5.0964
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027178525.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.7e-21192242256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_027178525.1 192 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 242
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MATAIDIYSY SNPVFSLSSD PLREELMKAL EPFMKGASSL PSSPTTTSSP FSSSSSSLSP  60
PSTSSSSCSS YYPFDSSSFS SEPNMYSSFT SYVPSTAHMF SQGLSSFDEM GFDEQSGGGS  120
IGLNHLTPYQ ILQVEAQIKL QNQQQQYLAA QSLQNYSSTR QLQHQNHSHL SFLGPKPVQM  180
KQVGTPPKPA KLYRGVRQRH WGKWVAEIRL PKNRTRLWLG TFDTAEEAAL AYDKAAYKLR  240
GEFARLNFPN LRHQLSQDFG DFKPLHSSVD AKLEAICQSL ADSQKQGNTG EQQQKKVGVQ  300
TIPKVENTFD DSLNSEYFYP GNEGVKVEET SSSLSPSRSD ETSSLEMSSP ESDITFLDFA  360
EPTFDQSENF LLQKYPSVEI DWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.13e-57ERF family protein