PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027178186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 132aa MW: 15547.4 Da PI: 7.9355 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 45.3 | 1.6e-14 | 4 | 85 | 12 | 94 |
HTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 12 ksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 +++ l++p f+++ +++++++++ +++ +sW v++ rkk++ y+ + W +Fvk+++Lk gD ++F+l+++++f +v XP_027178186.1 4 SEKKLRIPYAFVRNLkeKLSSRCTIESEAKNSVRNSWPVRI--RKKGRYyYICRLSWPKFVKDHHLKLGDYLLFHLIDKTTF--RV 85 67789*******8778777777877777778888*******..888888677889*********************987766..44 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MIFSEKKLRI PYAFVRNLKE KLSSRCTIES EAKNSVRNSW PVRIRKKGRY YYICRLSWPK 60 FVKDHHLKLG DYLLFHLIDK TTFRVKPYGA DCCPKKFNVY NSSSSSSDDE SDDGSDDSFD 120 DSDETEFYSL DE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16640.1 | 2e-08 | B3 family protein |