PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177991.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 279aa    MW: 30519.6 Da    PI: 5.8705
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-12119165252
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52 
                     +++GVr+++  g+WvAeIr p     +  ++ +lg+f +aeeAa+a ++   +
  XP_027177991.1 119 HFRGVRQRS-EGKWVAEIRNP-----HlgRTEWLGTFTSAEEAARAFDRKCIQ 165
                     69****999.7*********8.....667*****************9986655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MHRFADQMSQ QKSFKDEEHE CMVLALQHVI NNKEAEAQPQ GPAHQRQLAV MGELEGFASI  60
SPSSATASSG VPGGGSSSPG TMMEDKDHDQ SRSNDKKQKQ KKKKKNRDRE VDGEKRVVHF  120
RGVRQRSEGK WVAEIRNPHL GRTEWLGTFT SAEEAARAFD RKCIQYKGDR AKTNFPSSDY  180
ANANDDQSSS LQQQQQQALP PPAAAPPLSV NAPVGHASPL LTNTAAAGAT ATNSTATAAD  240
PGGTSWEEDE DLWDVFFRGD QILSDIDWMM FDSSPPLGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.14e-19ERF family protein