PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177683.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 307aa    MW: 34207.4 Da    PI: 6.5892
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.3e-192776255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++g
  XP_027177683.1 27 KFLGVRRRP-WGRFAAEIRDPTT---KERHWLGTFDTAEEAALAYDKAARSMRG 76
                    678******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSSSSSGKKK QQAQVKMQQE TGGDAVKFLG VRRRPWGRFA AEIRDPTTKE RHWLGTFDTA  60
EEAALAYDKA ARSMRGSRAR TNFVYSDMPP GSSVTAIICP EETIAPNHRS IQNNLRGFGY  120
HHDHINSLVQ QQQEGEVLQF HHQHQQQQHQ QISQCGSQDY LYSRVGHSKM EYSSYYDGYS  180
GTPGDVYASP KSHYHQQPSV SAAEGILHHF DSSHHYSNSS GDAGGSEQLP ALPSAFSSEV  240
WAEPSTHLCG TYTDEPTTEP ASSYCQKHLG LGFDSTIFVH SPLFSQMPPV SDSESFEPLH  300
LPSSYYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.12e-34ERF family protein