PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027177680.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 203aa    MW: 23222.7 Da    PI: 4.4682
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027177680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-1975125255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr ++ +g+++AeIrd + ng   r++lg+f++aeeAa a+++a+++++g
  XP_027177680.1  75 HYIGVRKRP-WGKYAAEIRDSTRNG--LRVWLGTFDSAEEAALAYDQAALAMRG 125
                     799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MNSSWMDHFS GYHLFSSHKQ IMDQADDQNL DFYISGDEEN VQYLWDTNTS SSSEVDSTEI  60
IFSLQTQPEK LEEKHYIGVR KRPWGKYAAE IRDSTRNGLR VWLGTFDSAE EAALAYDQAA  120
LAMRGPATAL NFPIDRVQES LQEMVWMYED GSSPVAALKE AHRMKNQSKR RGKAKQDKQN  180
DVLVLEDLGT DLLDELLSET CYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-35ERF family protein